CDS

Accession Number TCMCG015C06085
gbkey CDS
Protein Id XP_027098766.1
Location join(47836740..47836911,47838123..47838300,47839836..47840009,47840199..47840346,47840814..47841128,47841378..47841524,47841603..47841783,47842452..47842732,47842813..47842935,47843069..47843213,47843318..47843586,47843662..47843856,47844831..47845215,47845218..47845342,47846621..47846836)
Gene LOC113718041
GeneID 113718041
Organism Coffea arabica

Protein

Length 1018aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027242965.1
Definition LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH8-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description Zinc finger CCCH
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K18995        [VIEW IN KEGG]
ko:K20101        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCCTCCCCCACTTCATCATCTTGCTCTTCATACTCGTCGCCATTTGCATCGTCGTCGTCATCTTCGTCGAATTTTGCTTCTCTTTCGATATCGGCAATGAGGGACAAAATTATCGAGAAAATTCAGGAAAACCGCGTCACTCTGATCGTCGGCGAACCTGGTTGCGGGAAGAGTTCACAAGTTCCCCAGTTCTTACTGGAAGAAAACATTGAGCCCATTCTCTGTACACAACCAAGAAGATTTGCCGTTGTTGCAGTTGCCAGCATGGTTGCAAAGGCTCGGAAATGCGAAGTTGGTGGAGAGATTGGATATCATATAGGTCATTCAAAGGTTTTCTCAGCAAGGTCAAAAATTATCTTCAAAACTGCTGGAGTTTTGTTGGATGAAATGCGAGAGAAGGGATCGCATGCATTGAAGTACAAAGTTATAATTCTTGATGAAGTGCATGAAAGATCAGTCGAGTCGGATCTTGTTCTTGTTTGTGTGAAGCAGTTTTTGCTTAAAAATACTGGCCTGAGGCTTGTGTTGATGTCTGCTACTGCTGATATTGCTAAATATCGGGAGTACTTCAGGGATCTTGGCAGGGGTGAAAGGGTAGAAGTGTTGGCAATTCCTACTACCAGCAAAGACACCATATTCCAGCGGAAAGTTCTGTATCTTGAACAGGTGACTGAATTCCTTGGAATAAGATCAGAGAACTTGCCTTTGAAATATTGTTCTGGACCAAGCCCATTGATGGCTGATGCTGGTATTAAAGCTGAAGTGCACAAGCTTATACATGATTTGGTGTTGCACATTCATAAAAATGAACCTGATATTGAAAAGAGCATTTTGATCTTCCTCCCTACATACTATTCACTCGAGCAACAATGGTTTTTTCTGAAGCCTTTTAGTAAAACATTCAAGGTTCACATTCTGCATCGCAGTGTTGATACTGAACAAGCTCTGAAGGCCATGAAGATATGGAAGTCCCACAGGAAGGTAATATTGGCCACGAATATTGCTGAATCATCAGTCACAATTCCCCATGTGGGCTATGTAATTGATTCATGCCGTTCTTTACGAGTTTTCTGGGACAACAATCGTAAAATAGATTCTGCAGAACTTGTGTGGGTTTCCCAGTCTCAGGCCAACCAGCGCAAGGGAAGAACAGGTCGGACTTGTGACGGAAATGTCTATCGCTTAGTTACAGGATCCTTCTTCAATCAACTGGAAGAATATGAGCCTTCAGCAATACTGAGGTTGTCGTTAAGGCAGCAAGTACTTCAACTCTGCTGTGCTGAATCTAAAGCTATAAATGATCCCAGAGTCTTGTTGCAAAAGGCTCTGGATCCTCCGTACCCTCAAGTTGTTGATGATGCTATGGATTTGCTTGTACGCATCCATGCATTAGGAAGAACACTGTCTAGGGGCCGGCCTGAGCCTACATTTTATGGACGACTGGTCTCTAGTTTCAACCTGTCATTTGATGCTTCTGTCCTTATTCTTAAGTTTGGAGACCTAGGTATGCTACGTGAAGGCATCCTGGTAGGCATACTAATGGATATGCAGCCTCTGCCTATTCTTCGACCCTTTGGCCAAGAATATTTGCATGTGGATTACTCTAGTAACTATTATTCAGAAGACAGCAGGAGCACTGGATTAACAGGAAGAAAGGAGGTCCTTTGTATGGCAAATTTGGGTGCATTTCAGTTTTGGCAACTTGTTTTCAAGGACAATTGTCGTCTTGAAAGGTTGAAACAGCTTCTTAAATTTGATGGAACAGAAGATGAACATGGCATGCTGCCTAAGATTGAGGAAGAGTGGTGCTCAAATCACTATCTTGTGCAATCAGCCATCAATCAAGTTGCTGACTCATATGATGAGATTGTAAGTTCGTTGCACCGCTTCCGACCCAAATGTTTGGTAACATCGAATGGTGTACCATCATATTATGAACCTCGCGAATATTGGCACACATGTTATCTTCCCTCTGAGCAAAATAGGGGTGCTGATGCACTAGGTGTTGATGATGATGAGTTAGAGCTTCACAATGGAATCCAAAAATGTGCTGCTGTACCCTTTGTCTCATTCAGTCACTTTCGAATGTCTGAAGTTGCTGAAAAGTTGGCAGCAGTTGTTAAAGAGATGAGAGTTAAGCACAGAGGAGATATATCTGGTGATCATAAAGAAACTGCTGACAGTCATGATTGTCATACCGTTATGGAGGCTTCTGTATGTAAATTTTTCATTAATGGGCTCTGCAACAAGGGCAGTCAATGTTTGTACTCTCATTCTCTGCAAGCAAAAAGACCTCTTTGTAAATTCTTCTTCTCTTTACAGGGTTGCCGTAATGGAGAATTTTGCTTCTTTTCTCATGATTCAATTTCTTCATCACCAGGCAATGGGGTAAGCTCCTGCTTGCCAGAAGATGAAAATGCTGATGCACGTACACTTTTGCGATTATTGCCCGCATCTCCACAAGAATGCGTCCTGGTGTTGGATGATACTGATTTTCGCTTTTCTTCTAATCTTGCGCGTCACTGTTGCCCGTCCTCTATAATTTTGACAACACCTTCGCCGCATGAATCCACAATTGACCCATTGCTGAAGGGTGTCAAAATTCTGTGGGGTCTGTCCCACCCCTATGAGACAATCATCTGCAAAGCAGGGGAGAATGTGGTCCCATGGAATAAAGTTAAATGCATGCCCAGTTTGATAGCGAATATGGAGGTACAGAAAGGTCAAATAAAGACTTTCTTTGAGTATTTATCCATCCGGTTCTTGGCAGATGCGCTATATGAAGTGCGAGTAATCATTACAATGAACAACATTCGGTTTTCTCAGTTGCAGGTTGAAAAGTTGGCCAGGGATGCCTTCTTCTTTCTTGAGGAGTCATTTCCTTATGATGAGCAAAGCTTTGGGGAACTGTTTGATGAAATATCTACAAAGAAGGCGATGGCAGTGGCAAAGCCAATTTCATATGTTTTCAGAGTGCATCCGCCCGCGAACATCCAATTTGGTGATTACCGAAAAGTGCTTCACCAACGTTTAAATGACATCAATTAA
Protein:  
MASSPTSSSCSSYSSPFASSSSSSSNFASLSISAMRDKIIEKIQENRVTLIVGEPGCGKSSQVPQFLLEENIEPILCTQPRRFAVVAVASMVAKARKCEVGGEIGYHIGHSKVFSARSKIIFKTAGVLLDEMREKGSHALKYKVIILDEVHERSVESDLVLVCVKQFLLKNTGLRLVLMSATADIAKYREYFRDLGRGERVEVLAIPTTSKDTIFQRKVLYLEQVTEFLGIRSENLPLKYCSGPSPLMADAGIKAEVHKLIHDLVLHIHKNEPDIEKSILIFLPTYYSLEQQWFFLKPFSKTFKVHILHRSVDTEQALKAMKIWKSHRKVILATNIAESSVTIPHVGYVIDSCRSLRVFWDNNRKIDSAELVWVSQSQANQRKGRTGRTCDGNVYRLVTGSFFNQLEEYEPSAILRLSLRQQVLQLCCAESKAINDPRVLLQKALDPPYPQVVDDAMDLLVRIHALGRTLSRGRPEPTFYGRLVSSFNLSFDASVLILKFGDLGMLREGILVGILMDMQPLPILRPFGQEYLHVDYSSNYYSEDSRSTGLTGRKEVLCMANLGAFQFWQLVFKDNCRLERLKQLLKFDGTEDEHGMLPKIEEEWCSNHYLVQSAINQVADSYDEIVSSLHRFRPKCLVTSNGVPSYYEPREYWHTCYLPSEQNRGADALGVDDDELELHNGIQKCAAVPFVSFSHFRMSEVAEKLAAVVKEMRVKHRGDISGDHKETADSHDCHTVMEASVCKFFINGLCNKGSQCLYSHSLQAKRPLCKFFFSLQGCRNGEFCFFSHDSISSSPGNGVSSCLPEDENADARTLLRLLPASPQECVLVLDDTDFRFSSNLARHCCPSSIILTTPSPHESTIDPLLKGVKILWGLSHPYETIICKAGENVVPWNKVKCMPSLIANIXEVQKGQIKTFFEYLSIRFLADALYEVRVIITMNNIRFSQLQVEKLARDAFFFLEESFPYDEQSFGELFDEISTKKAMAVAKPISYVFRVHPPANIQFGDYRKVLHQRLNDIN